Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876593.1_cds_XP_016436157.1_32046
CDS Infomation

[gene=LOC107762325] [db_xref=GeneID:107762325] [protein=coiled-coil domain-containing protein 18-like] [protein_id=XP_016436157.1] [location=complement(join(39952..40330,40423..40493,60643..60724,60805..60872,60958..61024,61152..61282,61423..61530,62286..62351,62485..62551,63349..63425,64399..64509,65518..65632,66301..66374,67468..67564,67697..67749,68422..68496))] [gbkey=CDS]
Sequence

ATGGGTGGTGAACCAATGAACTTCCGTGACGTCTTTCTTTACAGTCAAGCTTTGGAGGGC
ATATCAATATCTATGATTCTTGAAGCGCCAAATGAAGAAGAAGTCTCTTTCCTGCTTGAA
TTGTTTGGACTCTGTCTCACTGGAGGAAAAGAGGTTCACTATGCAATAGTCAGCAGTATC
CAGGATCTGGCAAAAGCTTTCTCAAGCTACCAAGATGAAGTATTGGTAAAGCGAGAGGAG
CTGCTCCAGTTTGCAGAAAGTGCTATCACAGGTTTGAAAATTAATGCAGATCTTGGGAGA
ATTGATGCTGAGGTCTCATTGTTGAAGAAAAAACTTGATGAAATAAAAGCAGCAAAGGAC
CCAAATGGTGAGGGTCATGAAATGATGTCTCAAGAGACTGTTGCTTCAATAGAGGCTCTG
AAAGGAGCACTTGCACATATTCGGGTCTGCTCTAAATTAGAAGGGCTTCTACTGAAGAAA
AAAGCTCTGAAATATGGGGACTCCCCTGAAGTCCATGTTCAGAAGGTTGATAAGTTGAAA
GTCTTATCTGAATCTCTTGCTAGCTCCACCTGCAAAGCTGAAAAGAAGATCTCCGACCAC
AGAATTCAGAAAGAGGAGGCACTAAAATTCCGTGTGACCAAGACTAGCGAAGTTGGTGAA
ATAGAGAAGGACTTAGCGACTGAGGTTTCTGCACTGGAGAAACTAAGAGATGAGATTGAA
GCTCAGTTGAAACAGGTTAATATCTCATTGGCTGCGGCTAATGCACGCCTTCAAAATGTA
CGAGAAGAGAGGGACCAGTTCTATGAAGCTAATGATCAGATTGTTGCTCATTTAAAAACT
AGGGAAGACGAGCTGACAAAATCCATTGGCTCATGTAAAGTTGAAGCAAATATCCTTAGT
ACATGGATTAACTTTTTGGAAGATACTTGGACCCTTCAGTCTTCATTTACAGAGAGTAAA
GACAAGGAGGTCAGTGTTGAACTCGAAAAGCATGAGGATTATTTTGTAAACTTGGTGATG
CAACTCCTCTCTGTTTATGAGAAAGAGTTGAGGCCTTCTATTGATCGCATTTCTAAATTT
GTTGAGAACTTGAAGACTTTAGGTGAAGGCTCAGCTGTGGGATCTGGTGTCTCAAAATCG
TTGAGCCCCAGGAAAAGTCTGGAGGAGGAATACTTGGACTATGAAGCCAAGATTATAACC
ACATTTAGTGTAGTCGACAACATGAGGGAGCAGTTCTACTCTCAACAAGAGAAAATCTCC
AGGAAAGATGATCCAGATATGAAAAAGCTGTTTGAAAACATTGAGAAGCTAAGACAGGAA
TTTGAATCTATTGAACGACCAAATTTAGAAATGGAAATCCCTGTCCAAGAGGGAGACGAT
TCTTCCGATGAAATGGTAGATGATAATATTTCACATCCTACAAAGCAGGCCATAGAAATT
GCCGTAGCTGGGGAAAGCAAGAAAAATGAACCACCATCTGCCAAAACGGAGCAGGCCTTG
GACCCTGAAGCAGAGTTGGCAAAGTTAGAATCTGAATTTGGTAAGATTACTCGTGATTAC
TCTGCAGAAGAGATAGGTGATTGGGAATTTGATGAGCTGGAGAAAGAGTTGAAATCTGGG
GACTCAGCGACTAGTAAATAG

Peptide Sequence

PEP ID

XP_016436157.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein 18-like [Nicotiana tabacum]
Sequence

MGGEPMNFRDVFLYSQALEGISISMILEAPNEEEVSFLLELFGLCLTGGKEVHYAIVSSI
QDLAKAFSSYQDEVLVKREELLQFAESAITGLKINADLGRIDAEVSLLKKKLDEIKAAKD
PNGEGHEMMSQETVASIEALKGALAHIRVCSKLEGLLLKKKALKYGDSPEVHVQKVDKLK
VLSESLASSTCKAEKKISDHRIQKEEALKFRVTKTSEVGEIEKDLATEVSALEKLRDEIE
AQLKQVNISLAAANARLQNVREERDQFYEANDQIVAHLKTREDELTKSIGSCKVEANILS
TWINFLEDTWTLQSSFTESKDKEVSVELEKHEDYFVNLVMQLLSVYEKELRPSIDRISKF
VENLKTLGEGSAVGSGVSKSLSPRKSLEEEYLDYEAKIITTFSVVDNMREQFYSQQEKIS
RKDDPDMKKLFENIEKLRQEFESIERPNLEMEIPVQEGDDSSDEMVDDNISHPTKQAIEI
AVAGESKKNEPPSAKTEQALDPEAELAKLESEFGKITRDYSAEEIGDWEFDELEKELKSG
DSATSK

Transcript Sequence

Gene sequence data has not been registered.